BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F02SP1|AL425891
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1129 1583 0.0
>3x_Contig1129
Length = 3849
Score = 1583 bits (798), Expect = 0.0
Identities = 799/800 (99%)
Strand = Plus / Plus
Query: 1 atctttctcgaatcccttactcatacgtacagagctctgtaaggtgccgtacacacttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1527 atctttctcgaatcccttactcatacgtacagagctctgtaaggtgccgtacacacttat 1586
Query: 61 ctccagccgaggtaacaataacctcctttgtagtaacaagaaagagatttctagggactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1587 ctccagccgaggtaacaataacctcctttgtagtaacaagaaagagatttctagggactt 1646
Query: 121 agatactattccgtctcttctacgctattattttctcacggattatctgttcttgttgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1647 agatactattccgtctcttctacgctattattttctcacggattatctgttcttgttgga 1706
Query: 181 ttgtgtaatctgtcaactcaataaactatcttagaaaaagaaggtcctccgaatacttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1707 ttgtgtaatctgtcaactcaataaactatcttagaaaaagaaggtcctccgaatacttgt 1766
Query: 241 gtagtgacataatctacactacattgtaaaggaacctcggagagatagagaaggcatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1767 gtagtgacataatctacactacattgtaaaggaacctcggagagatagagaaggcatgaa 1826
Query: 301 aaaaaaaaaagatctaaatggtagtcaatataaggtatactggaatgccagtacaaacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1827 aaaaaaaaaagatctaaatggtagtcaatataaggtatactggaatgccagtacaaacta 1886
Query: 361 ggtccgaaaaacggcatttatgccacatgtctaaagacaacacaaagaacgggtttaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1887 ggtccgaaaaacggcatttatgccacatgtctaaagacaacacaaagaacgggtttaaaa 1946
Query: 421 ctatcgagaatggtggataaattgtaatgcatacacagtaaaggaacggaagtaggaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1947 ctatcgagaatggtggataaattgtaatgcatacacagtaaaggaacggaagtaggaaaa 2006
Query: 481 atgagggctccatcgtagattaactctgtatacataagttggggcttttatcaaaaacta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2007 atgagggctccatcgtagattaactctgtatacataagttggggcttttatcaaaaacta 2066
Query: 541 gataggtgcgtgttaattcgaggatcgcaaccagaaacaataaagacacaaacacacaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2067 gataggtgcgtgttaattcgaggatcgcaaccagaaacaataaagacacaaacacacaga 2126
Query: 601 agtaaagctacaaatttccagttctatgagaagccaagtgcgaagttatagttaagamaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2127 agtaaagctacaaatttccagttctatgagaagccaagtgcgaagttatagttaagaaaa 2186
Query: 661 cgcttagtcaactgtccagaagacctattacgggtcctttcttgttctctttcttttttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2187 cgcttagtcaactgtccagaagacctattacgggtcctttcttgttctctttcttttttt 2246
Query: 721 gcggactctatgcgcgttaacaagaaacggctcttataaatcatgcaggtttatccgaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2247 gcggactctatgcgcgttaacaagaaacggctcttataaatcatgcaggtttatccgaaa 2306
Query: 781 tctgggtaaaaaaaacaaaa 800
||||||||||||||||||||
Sbjct: 2307 tctgggtaaaaaaaacaaaa 2326
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,139
Number of Sequences: 1807
Number of extensions: 12139
Number of successful extensions: 101
Number of sequences better than 1.0e-20: 1
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)